Uses of Interface
net.sf.jfasta.FASTAElement

Packages that use FASTAElement

Package	Description
net.sf.jfasta	This package contains all public interfaces of this component.
net.sf.jfasta.impl	This package contains all classes of this component.

Uses of FASTAElement in net.sf.jfasta

Methods in net.sf.jfasta that return FASTAElement

Modifier and Type	Method and Description
FASTAElement	FASTAFile.getElementByHeader(String header) Retrieves FASTAElement with given header string, if there is such an element.
FASTAElement	FASTAFile.getLargestElement() Retrieves Element with the longest sequence.

Uses of FASTAElement in net.sf.jfasta.impl

Classes in net.sf.jfasta.impl that implement FASTAElement

Modifier and Type	Class and Description
class	FASTAElementImpl TODO description

Fields in net.sf.jfasta.impl with type parameters of type FASTAElement

Modifier and Type	Field and Description
protected Collection<FASTAElement>	FASTAFileImpl.elements

Methods in net.sf.jfasta.impl that return FASTAElement

Modifier and Type	Method and Description
protected FASTAElement	FASTAElementIterator.doRead()
FASTAElement	FASTAFileImpl.getElementByHeader(String header)
FASTAElement	FASTAFileImpl.getLargestElement()

Methods in net.sf.jfasta.impl that return types with arguments of type FASTAElement

Modifier and Type	Method and Description
Iterator<FASTAElement>	FASTAFileImpl.iterator()

Methods in net.sf.jfasta.impl with parameters of type FASTAElement

Modifier and Type	Method and Description
boolean	FASTAFileImpl.add(FASTAElement e)
void	FASTAFileWriter.write(FASTAElement e) Writes a FASTAElement.

Method parameters in net.sf.jfasta.impl with type arguments of type FASTAElement

Modifier and Type	Method and Description
boolean	FASTAFileImpl.addAll(Collection<? extends FASTAElement> c)

Constructors in net.sf.jfasta.impl with parameters of type FASTAElement

Constructor and Description
FASTAFileImpl(FASTAElement element)

Constructor parameters in net.sf.jfasta.impl with type arguments of type FASTAElement

Constructor and Description
FASTAFileImpl(Collection<? extends FASTAElement> elements)